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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10843850_10844014_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10843850 - 10844014

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCCAAGGAC

5'SS Class:

weak_major

3'SS Sequence:

CGATGGAGCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGCGAT

U12 Branch Point Sequence:

AAGCCCAGGAGC

Flanking Amino Acid:

TKQKPKAAKQKPLGPLPKGS

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.2

61.1

37.6

Major BPS

43.3

-0.4

1.4

35.9

Major PPT

45.8

-0.2

1.1

36.7

38.4

Minor 5ss

15.7

-4

3.8

23.1

30.5

Minor BPS

39.9

-0.8

1.9

44.33

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006050

10843519 - 10847368

3850