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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10844623_10847099_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10844623 - 10847099

Intron Length:

2477

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCATGCCC

5'SS Class:

weak_major

3'SS Sequence:

CCCGGTTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAA

U12 Branch Point Sequence:

TCACAGATAAAG

Flanking Amino Acid:

SDTRRPSCSPGQIARGRRHP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.3

56.1

39.5

Major BPS

54.7

0.12

1.2

56.1

37.3

Major PPT

61.4

0.26

52.8

41.6

Minor 5ss

16.7

-3.8

3.5

Minor BPS

36.8

-1.1

2.3

41.27

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006050

10843519 - 10847368

3850