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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10848048_10848600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10848048 - 10848600

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTGCCCTCACCC

Flanking Amino Acid:

PVIYIVMNKQFRNCMITTLC

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

84.8

0.78

0.7

76.5

32.1

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

48.9

-0.1

1.9

59.89

45.1

Associated Gene:

Gene:

RHO

Ensembl Gene ID:

ENSAPLG00000005189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005391

10847928 - 10850730

2803