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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10848841_10849040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10848841 - 10849040

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAT

U12 Branch Point Sequence:

TCCCCCACATCC

Flanking Amino Acid:

YGNLVCTVKEAAAQQQESAT

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

52.8

0.07

1.1

60.5

36.2

Major PPT

71.4

0.48

0.8

64.9

30.7

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

43.2

-0.5

53.03

44.2

Associated Gene:

Gene:

RHO

Ensembl Gene ID:

ENSAPLG00000005189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005391

10847928 - 10850730

2803