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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10856504_10856902_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10856504 - 10856902

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGTTT

5'SS Class:

major

3'SS Sequence:

CTTCCCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTCAG

U12 Branch Point Sequence:

TTGTGGTTCAGT

Flanking Amino Acid:

SITMCPSCFQEWLFGILELS

Intron Amino Acid Position:

1206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

72.3

39.7

Major BPS

47.3

-0.1

1.7

57.1

49.4

Major PPT

82.3

0.73

0.7

80.2

25.1

Minor 5ss

41.3

-1

3.7

64.1

47.4

Minor BPS

40.9

-0.6

2.8

66.78

49.8

Associated Gene:

Gene:

IFT122

Ensembl Gene ID:

ENSAPLG00000004234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036532

10856339 - 10888274

31936