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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10866052_10867170_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10866052 - 10867170

Intron Length:

1119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTATGTACCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATTATGTACCT

Flanking Amino Acid:

LYVETLRWEEAFALSEKHPE

Intron Amino Acid Position:

791

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

75.5

40.6

Major BPS

84.7

0.86

74.3

40.7

Major PPT

73.6

0.53

0.9

70.9

39.5

Minor 5ss

44.7

-0.6

2.9

58.1

40.6

Minor BPS

47.1

-0.1

2.3

73.69

43.2

Associated Gene:

Gene:

IFT122

Ensembl Gene ID:

ENSAPLG00000004234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004413

10855772 - 10888274

32503

ENSAPLT00000028828

10856126 - 10888274

32149

ENSAPLT00000028789

10856126 - 10888274

32149

ENSAPLT00000027255

10855772 - 10888274

32503

ENSAPLT00000020502

10855772 - 10888274

32503

ENSAPLT00000036532

10856339 - 10888274

31936