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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10867343_10868218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10867343 - 10868218

Intron Length:

876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAGGTTTT

5'SS Class:

major

3'SS Sequence:

TTATGGTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTGTCATCT

Flanking Amino Acid:

EISGDHGWVDTLIEVARKLD

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

78.8

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

66.3

0.37

1.1

58.3

47.1

Minor 5ss

46.1

-0.4

3.1

65.4

39.5

Minor BPS

46.4

-0.1

2.4

72.47

44.4

Associated Gene:

Gene:

IFT122

Ensembl Gene ID:

ENSAPLG00000004234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028789

10856126 - 10888274

32149

ENSAPLT00000027255

10855772 - 10888274

32503

ENSAPLT00000020502

10855772 - 10888274

32503

ENSAPLT00000036532

10856339 - 10888274

31936

ENSAPLT00000004413

10855772 - 10888274

32503

ENSAPLT00000028828

10856126 - 10888274

32149