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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10875476_10877080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10875476 - 10877080

Intron Length:

1605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCTT

5'SS Class:

strong_major

3'SS Sequence:

TGGAAATCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGCTTTCTAATA

Flanking Amino Acid:

FSMSAVEVPQSAPMYQYLER

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

74.6

41.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

60.7

0.24

55.4

44.4

Minor 5ss

43.9

-0.7

3.2

65.5

45.6

Minor BPS

53.9

0.12

1.6

63.76

37.2

Associated Gene:

Gene:

IFT122

Ensembl Gene ID:

ENSAPLG00000004234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028789

10856126 - 10888274

32149

ENSAPLT00000027255

10855772 - 10888274

32503

ENSAPLT00000020502

10855772 - 10888274

32503

ENSAPLT00000036532

10856339 - 10888274

31936

ENSAPLT00000004413

10855772 - 10888274

32503

ENSAPLT00000028828

10856126 - 10888274

32149