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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10900927_10902149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10900927 - 10902149

Intron Length:

1223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGCTT

5'SS Class:

major

3'SS Sequence:

CTCTTCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

CTCTTCTGCACA

Flanking Amino Acid:

LADHIPALVPGIVFSLADKS

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

68.5

Major BPS

67.7

0.44

38.9

Major PPT

75.7

0.58

0.9

71.3

33.2

Minor 5ss

36.2

-1.6

3.6

52.8

45.5

Minor BPS

49.4

-0

1.9

63.1

43.6

Associated Gene:

Gene:

CAND2

Ensembl Gene ID:

ENSAPLG00000003936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021423

10896281 - 10911894

15614

ENSAPLT00000004041

10896281 - 10911143

14863

ENSAPLT00000004039

10897329 - 10911894

14566