Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_10906817_10907441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10906817 - 10907441

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAAAG

5'SS Class:

major

3'SS Sequence:

CTGTTGCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

TGTTGCTTACAG

Flanking Amino Acid:

ALDILSDMLSRLGGTLYSFH

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.7

43.6

Major BPS

63.7

0.34

1.6

39.9

Major PPT

79.1

0.65

0.9

72.2

37.9

Minor 5ss

37.3

-1.4

3.1

48.6

47.1

Minor BPS

48.8

-0.2

2.2

61.3

46.1

Associated Gene:

Gene:

CAND2

Ensembl Gene ID:

ENSAPLG00000003936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021423

10896281 - 10911894

15614

ENSAPLT00000004041

10896281 - 10911143

14863

ENSAPLT00000004039

10897329 - 10911894

14566