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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10950582_10950960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10950582 - 10950960

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATTCTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TGCTCTTTATCG

Flanking Amino Acid:

MCGTGAIPIEGAMEWPSCYH

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.8

35.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

86.2

0.81

0.8

78.2

Minor 5ss

34.8

-1.7

3.1

50.1

46.1

Minor BPS

60.6

0.2

1.7

63.63

44.5

Associated Gene:

Gene:

THUMPD3

Ensembl Gene ID:

ENSAPLG00000003598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023355

10948492 - 10954390

5899

ENSAPLT00000003684

10948492 - 10953974

5483

ENSAPLT00000025153

10948492 - 10954390

5899