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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10951573_10952612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10951573 - 10952612

Intron Length:

1040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGTCC

5'SS Class:

major

3'SS Sequence:

AGTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TACTCCTGATAT

Flanking Amino Acid:

KADMTNFDVEVLLNIHNNEV

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

37.3

Major BPS

78.8

0.71

67.6

40.6

Major PPT

80.2

0.68

0.8

78.4

35.5

Minor 5ss

44.2

-0.6

44.7

Minor BPS

52.5

0.16

1.9

71.67

44.5

Associated Gene:

Gene:

THUMPD3

Ensembl Gene ID:

ENSAPLG00000003598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023355

10948492 - 10954390

5899

ENSAPLT00000003684

10948492 - 10953974

5483