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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10953671_10953779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10953671 - 10953779

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

GCGGCCTCACAC

Flanking Amino Acid:

FSVPARCLPQVHRLRSVDNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

67.5

37.7

Major BPS

55.5

0.14

64.3

32.4

Major PPT

81.7

0.71

0.7

72.9

Minor 5ss

33.6

-1.9

40.8

45.6

Minor BPS

41.6

-0.6

1.9

44.19

43.5

Associated Gene:

Gene:

THUMPD3

Ensembl Gene ID:

ENSAPLG00000003598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003684

10948492 - 10953974

5483