Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_10969256_10970186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10969256 - 10970186

Intron Length:

931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCGGCGTG

5'SS Class:

major

3'SS Sequence:

TGTGTGCATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TTTTCTTTTCCT

Flanking Amino Acid:

WARLWGRSQREIRTQLVEQF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.4

47.1

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

70.6

0.46

66.6

44.3

Minor 5ss

-1.8

3.6

46.4

Minor BPS

48.1

-0

3.6

87.77

37.8

Associated Gene:

Gene:

SRGAP3

Ensembl Gene ID:

ENSAPLG00000003289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022684

10969084 - 11016432

47349