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Intron Name: Anas_platyrhynchos_platyrhynchos_13_10982186_10989039_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10982186 - 10989039

Intron Length:

6854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCGTTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAA

U12 Branch Point Sequence:

TGACTCACAAAG

Flanking Amino Acid:

LLKVTNELYTVMKTYHMYHA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

81.8

31.8

Major BPS

56.2

0.15

64.6

32.2

Major PPT

78.2

0.63

0.8

76.2

32.4

Minor 5ss

34.8

-1.7

3.3

49.9

46.4

Minor BPS

41.9

-0.7

1.8

45.48

39.7

Associated Gene:

Gene:

SRGAP3

Ensembl Gene ID:

ENSAPLG00000003289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022684

10969084 - 11016432

47349

ENSAPLT00000020206

10974522 - 11021540

47019

ENSAPLT00000003426

10970187 - 11019674

49488

ENSAPLT00000045304

10974522 - 11019276

44755

ENSAPLT00000042286

10974522 - 11021540

47019