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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11006995_11007418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11006995 - 11007418

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

GCTTGTCAAACT

Flanking Amino Acid:

ESCIRYINLYGLQQQGIFRV

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

88.4

0.86

0.8

80.8

36.8

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

44.1

-0.3

2.3

64.66

45.9

Associated Gene:

Gene:

SRGAP3

Ensembl Gene ID:

ENSAPLG00000003289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020206

10974522 - 11021540

47019

ENSAPLT00000003426

10970187 - 11019674

49488

ENSAPLT00000045304

10974522 - 11019276

44755

ENSAPLT00000042286

10974522 - 11021540

47019

ENSAPLT00000022684

10969084 - 11016432

47349