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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11013541_11015737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11013541 - 11015737

Intron Length:

2197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTGTACTGAACT

Flanking Amino Acid:

NGTEPHTSDDEVEQIEAIAK

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.9

39.6

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

85.3

0.79

0.7

79.9

25.4

Minor 5ss

40.1

-1.1

2.8

45.2

Minor BPS

69.5

0.69

1.6

86.29

39.2

Associated Gene:

Gene:

SRGAP3

Ensembl Gene ID:

ENSAPLG00000003289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022684

10969084 - 11016432

47349

ENSAPLT00000020206

10974522 - 11021540

47019

ENSAPLT00000003426

10970187 - 11019674

49488

ENSAPLT00000045304

10974522 - 11019276

44755

ENSAPLT00000042286

10974522 - 11021540

47019