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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11015919_11016278_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11015919 - 11016278

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

ACATGCCAACCT

Flanking Amino Acid:

IPHQYIVVQDMDDAFSDSLS

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

81.4

26.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

82.8

0.74

0.7

76.2

32.4

Minor 5ss

-2.1

2.7

37.8

40.1

Minor BPS

38.4

-0.8

2.3

55.36

46.4

Associated Gene:

Gene:

SRGAP3

Ensembl Gene ID:

ENSAPLG00000003289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003426

10970187 - 11019674

49488

ENSAPLT00000045304

10974522 - 11019276

44755

ENSAPLT00000042286

10974522 - 11021540

47019

ENSAPLT00000022684

10969084 - 11016432

47349

ENSAPLT00000020206

10974522 - 11021540

47019