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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11016429_11016808_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11016429 - 11016808

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGGAAA

5'SS Class:

major

3'SS Sequence:

GAATTCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTGTGATGAATT

Flanking Amino Acid:

VDYGFGGVMGRVRLRSDGAA

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.1

41.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.6

0.6

0.9

69.8

40.9

Minor 5ss

30.7

-2.2

3.4

39.3

46.4

Minor BPS

49.3

0.02

2.1

73.94

Associated Gene:

Gene:

SRGAP3

Ensembl Gene ID:

ENSAPLG00000003289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020206

10974522 - 11021540

47019

ENSAPLT00000003426

10970187 - 11019674

49488

ENSAPLT00000042286

10974522 - 11021540

47019