Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_11041425_11041557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11041425 - 11041557

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTGAAG

5'SS Class:

major

3'SS Sequence:

CGTCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGCAG

U12 Branch Point Sequence:

GAGCCCTGAGCC

Flanking Amino Acid:

PWPASLTPLKAVDELLRCGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.1

58.6

41.7

Major BPS

44.4

-0.3

1.8

57.1

49.4

Major PPT

75.5

0.57

0.9

68.7

37.2

Minor 5ss

25.2

-2.9

3.1

30.3

Minor BPS

48.2

-0.1

1.7

55.49

41.8

Associated Gene:

Gene:

RAD18

Ensembl Gene ID:

ENSAPLG00000003138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003199

11041371 - 11083565

42195