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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11052514_11054713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11052514 - 11054713

Intron Length:

2200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATGCTAGTAAAA

Flanking Amino Acid:

STSVVKVVNKVECPVCGVAI

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.3

0.66

0.8

75.9

32.7

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

41.8

-0.6

2.1

53.36

38.5

Associated Gene:

Gene:

RAD18

Ensembl Gene ID:

ENSAPLG00000003138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003199

11041371 - 11083565

42195