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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11125837_11128896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11125837 - 11128896

Intron Length:

3060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTGTGCTCACCC

Flanking Amino Acid:

PKRINEDVVKVDFEDVIAEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

73.6

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

77.3

0.61

0.8

68.8

37.2

Minor 5ss

35.6

-1.6

3.7

55.9

48.3

Minor BPS

45.5

-0.3

2.2

57.89

Associated Gene:

Gene:

CAV3

Ensembl Gene ID:

ENSAPLG00000003098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003136

11125495 - 11129010

3516