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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11151204_11151773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11151204 - 11151773

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

ACTCTCTGATTT

Flanking Amino Acid:

CRVPRSALVRECHRCHGRGR

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

0.72

38.9

Major PPT

80.5

0.69

0.9

77.3

35.6

Minor 5ss

-2.2

2.9

34.5

Minor BPS

48.2

-0

1.7

64.15

40.6

Associated Gene:

Gene:

SSUH2

Ensembl Gene ID:

ENSAPLG00000003015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003055

11148390 - 11155825

7436