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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11152747_11153940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11152747 - 11153940

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTTGCCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

GTTGCCTCCAAG

Flanking Amino Acid:

CQLCSGTGRSRCSTCSGRGS

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

60.1

0.23

1.1

56.3

39.1

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

44.4

-0.5

2.2

53.72

46.6

Associated Gene:

Gene:

SSUH2

Ensembl Gene ID:

ENSAPLG00000003015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003055

11148390 - 11155825

7436