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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11154034_11154725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11154034 - 11154725

Intron Length:

692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCGCTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CAACCTCTGATC

Flanking Amino Acid:

LRHFRQLVITWRNNVFEFVS

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

42.2

Major BPS

0.72

38.9

Major PPT

78.8

0.65

0.8

72.4

32.2

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

45.5

-0.3

1.6

49.13

34.8

Associated Gene:

Gene:

SSUH2

Ensembl Gene ID:

ENSAPLG00000003015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003055

11148390 - 11155825

7436