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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11177326_11177544_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11177326 - 11177544

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGACG

5'SS Class:

major

3'SS Sequence:

GTTTGTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

GGTTGCAGAAAC

Flanking Amino Acid:

LRPRCAGCDEIIFSEDYQQA

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

44.2

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

76.1

0.59

0.9

69.9

36.6

Minor 5ss

31.2

-2.2

3.3

39.9

45.9

Minor BPS

43.1

-0.5

2.1

55.75

41.4

Associated Gene:

Gene:

LMCD1

Ensembl Gene ID:

ENSAPLG00000002970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032082

11177167 - 11202945

25779

ENSAPLT00000022195

11177167 - 11194819

17653

ENSAPLT00000003015

11177167 - 11189361

12195

ENSAPLT00000032837

11177167 - 11190434

13268