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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11183721_11187639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11183721 - 11187639

Intron Length:

3919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCGCCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGATGCTGACTG

Flanking Amino Acid:

WAPPGLTQKLAMQYMELLPK

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

34.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

72.2

0.5

0.8

62.2

34.7

Minor 5ss

28.7

-2.4

3.5

43.2

Minor BPS

43.8

-0.6

2.1

49.74

44.2

Associated Gene:

Gene:

LMCD1

Ensembl Gene ID:

ENSAPLG00000002970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032082

11177167 - 11202945

25779

ENSAPLT00000022195

11177167 - 11194819

17653

ENSAPLT00000003015

11177167 - 11189361

12195

ENSAPLT00000032837

11177167 - 11190434

13268