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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11261230_11276884_F

Intron Information:

Intron Rank:

141935

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11261230 - 11276884

Intron Length:

15655

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

CAG|GTCAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTTACGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

TCCTCTCTTACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

30.2

Major BPS

52.1

0.05

1.3

41.8

Major PPT

-0.2

3.2

71.7

32.9

Minor 5ss

37.3

-1.4

2.8

49.7

46.6

Minor BPS

47.7

-0.3

55.72

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048150

11261018 - 11277550

16533