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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11277102_11277264_F

Intron Information:

Intron Rank:

141936

Intron Class:

major

Intron Phase:

Intron Coordinates:

11277102 - 11277264

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCATTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGTTTTTCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.1

35.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

78.8

0.65

0.9

37.8

Minor 5ss

32.7

-2

3.1

39.1

46.7

Minor BPS

48.9

-0

1.9

71.95

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048150

11261018 - 11277550

16533