Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_11710215_11714037_R

Intron Information:

Intron Rank:

148847

Intron Class:

major

Intron Phase:

Intron Coordinates:

11710215 - 11714037

Intron Length:

3823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGACGTAT

5'SS Class:

major

3'SS Sequence:

TCTGTTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTATAATTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

64.4

37.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

78.7

0.64

75.5

38.3

Minor 5ss

38.6

-1.3

3.4

51.8

47.3

Minor BPS

0.67

1.8

87.76

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035746

11698598 - 11714139

15542