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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_11722417_11722521_R

Intron Information:

Intron Rank:
143832
Intron Class:
major
Intron Phase:
Intron Coordinates:
11722417 - 11722521
Intron Length:
105

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGATTCCC
5'SS Class:
major
3'SS Sequence:
TATTTTTAACAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
GTATTTTTAACA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.3
0.69
1
67.7
37.5
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
65
0.34
1.2
66
43.4
Minor 5ss
30.1
-2.3
2.7
36.9
40.1
Minor BPS
74.6
0.77
1.1
76.5
34.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024694
Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000027057
11722409 - 11725248
2840