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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1174063_1177394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1174063 - 1177394

Intron Length:

3332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GCTATGCCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

TTAACAACAAGA

Flanking Amino Acid:

SWWHSDLTAKAQRLKQTLEP

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

61.5

0.26

0.9

53.9

36.6

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

40.9

-0.6

2.2

56.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043972

1155784 - 1183028

27245