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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11751038_11793166_R

Intron Information:

Intron Rank:

154402

Intron Class:

major

Intron Phase:

Intron Coordinates:

11751038 - 11793166

Intron Length:

42129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATGGAT

U12 Branch Point Sequence:

TCCCCTTTTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

48.4

-0.1

1.5

49.1

46.3

Major PPT

0.68

0.7

75.3

26.9

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

52.1

0.06

1.6

59.87

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030607

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035084

11749825 - 11793300

43476