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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1179090_1182641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1179090 - 1182641

Intron Length:

3552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAAAT

Flanking Amino Acid:

SSDSAHSLLDPYNAFFAAVK

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.2

80.7

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.5

0.75

0.8

81.1

Minor 5ss

37.4

-1.4

2.6

43.1

36.9

Minor BPS

71.5

0.75

1.6

90.38

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043972

1155784 - 1183028

27245