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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11830877_11833692_R

Intron Information:

Intron Rank:

135342

Intron Class:

major

Intron Phase:

Intron Coordinates:

11830877 - 11833692

Intron Length:

2816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CATTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

GCAGGAATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

83.1

0.74

0.8

77.1

31.2

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

39.6

-0.7

2.1

47.03

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029041

11828261 - 11833981

5721

ENSAPLT00000018422

11829472 - 11833981

4510