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Intron Name: Anas_platyrhynchos_platyrhynchos_13_11990521_11992092_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11990521 - 11992092

Intron Length:

1572

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCAGGTGTC

5'SS Class:

major

3'SS Sequence:

AGGGCCCGGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGTCAG

U12 Branch Point Sequence:

GGTCCCGTCAGC

Flanking Amino Acid:

AVVGLGQGAARPGPAAAMLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.2

81.2

32.7

Major BPS

44.4

-0.3

1.6

48.7

45.1

Major PPT

48.2

-0.1

1.1

35.9

Minor 5ss

-2.8

4.3

43.2

44.5

Minor BPS

41.1

-0.7

2.5

53.16

44.1

Associated Gene:

Gene:

ARL8B

Ensembl Gene ID:

ENSAPLG00000016295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017001

11978688 - 11992139

13452