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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12011585_12012510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12011585 - 12012510

Intron Length:

926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

AATGTTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATTTTTAATT

Flanking Amino Acid:

IIALQNGLQAGDLSSRNLDS

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.5

0.53

0.9

70.3

40.4

Minor 5ss

31.6

-2.1

2.7

34.1

41.4

Minor BPS

0.83

1.1

81.34

34.2

Associated Gene:

Gene:

BHLHE40

Ensembl Gene ID:

ENSAPLG00000016313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017021

12010725 - 12013871

3147