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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12013412_12013580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12013412 - 12013580

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

CCGCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

TCACCCGGCACC

Flanking Amino Acid:

RGLKRSEDTKETYKLPHRLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

67.8

43.5

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

0.41

0.8

61.3

29.1

Minor 5ss

31.1

-2.2

3.3

41.9

44.9

Minor BPS

41.3

-0.7

2.4

53.45

43.9

Associated Gene:

Gene:

BHLHE40

Ensembl Gene ID:

ENSAPLG00000016313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017021

12010725 - 12013871

3147