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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12102189_12102810_R


Intron Information:

Intron Rank:
41

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
12102189 - 12102810

Intron Length:
622

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATCCCC

5'SS Class:
major

3'SS Sequence:
TTATGTATTTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
CTGTTCTTATGT

Flanking Amino Acid:
SDRDVPTRKKAREPMTQITE

Intron Amino Acid Position:
1811

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1.1
62.6
42.2

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
76.9
0.61
0.9
74.9
39.6

Minor 5ss
39.2
-1.2
3
52.3
44.4

Minor BPS
52.8
0.17
1.9
70.6
46.7

Associated Gene:

Gene:
ITPR1

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12060664 - 12212156
151493

12060664 - 12212156
151493

12060664 - 12212156
151493

12060664 - 12212156
151493