Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_12175538_12176793_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12175538 - 12176793

Intron Length:

1256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CACTTACCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTCACTTACCT

Flanking Amino Acid:

FYKLRSIGDSVVIGDKVVLN

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.8

38.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

73.4

0.53

0.9

65.7

34.8

Minor 5ss

37.3

-1.4

3.3

51.5

44.9

Minor BPS

58.8

0.35

1.9

78.43

43.5

Associated Gene:

Gene:

ITPR1

Ensembl Gene ID:

ENSAPLG00000016350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022171

12060664 - 12212156

151493

ENSAPLT00000018946

12060664 - 12212156

151493

ENSAPLT00000017097

12060664 - 12212156

151493

ENSAPLT00000024655

12060664 - 12212156

151493