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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12225069_12226565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12225069 - 12226565

Intron Length:

1497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

GCTTCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

TTTTGGTGACCT

Flanking Amino Acid:

QGSGSGRSGPMVAIPGGVFT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

57.9

41.8

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

79.8

0.67

0.8

73.3

31.6

Minor 5ss

31.7

-2.1

3.3

41.6

45.3

Minor BPS

45.2

-0.2

2.6

76.42

46.1

Associated Gene:

Gene:

SUMF1

Ensembl Gene ID:

ENSAPLG00000003538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018075

12224832 - 12247570

22739

ENSAPLT00000003620

12224817 - 12249928

25112

ENSAPLT00000040186

12224832 - 12247570

22739