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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12226740_12227381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12226740 - 12227381

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTTCCCTGATAA

Flanking Amino Acid:

FVNATGYLTEAEKFGDSFVF

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

0.7

0.8

73.8

36.9

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

54.2

0.13

1.8

71.67

39.6

Associated Gene:

Gene:

SUMF1

Ensembl Gene ID:

ENSAPLG00000003538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029392

12222389 - 12247570

25182

ENSAPLT00000003620

12224817 - 12249928

25112