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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12226803_12236848_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12226803 - 12236848

Intron Length:

10046

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCTTATCCG

5'SS Class:

weak_major

3'SS Sequence:

TGTCCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAG

U12 Branch Point Sequence:

TTCAGGTGATCT

Flanking Amino Acid:

FVDDGKIHTKVAAAPWWLPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.4

0.01

1.4

46.8

43.1

Major BPS

59.4

0.23

1.5

69.4

37.7

Major PPT

83.8

0.76

0.8

80.8

31.1

Minor 5ss

27.7

-2.6

3.7

34.4

34.8

Minor BPS

38.9

-0.7

2.5

61.14

48.2

Associated Gene:

Gene:

SUMF1

Ensembl Gene ID:

ENSAPLG00000003538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046488

12222389 - 12240853

18465