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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12236932_12238703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12236932 - 12238703

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTGTGCTGACGA

Flanking Amino Acid:

PEGPDSNIFNRMDHPVLHVS

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

87.5

0.84

0.7

81.1

30.9

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

43.7

-0.4

2.3

59.56

46.3

Associated Gene:

Gene:

SUMF1

Ensembl Gene ID:

ENSAPLG00000003538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046488

12222389 - 12240853

18465

ENSAPLT00000040186

12224832 - 12247570

22739

ENSAPLT00000003620

12224817 - 12249928

25112