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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12477786_12486704_F

Intron Information:

Intron Rank:

150939

Intron Class:

major

Intron Phase:

Intron Coordinates:

12477786 - 12486704

Intron Length:

8919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCAGA

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

TTTTCCTTCTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

42.7

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

31.9

-2.1

3.1

39.5

46.1

Minor BPS

50.3

0.09

3.6

91.83

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039709

12477472 - 12489725

12254