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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12477786_12487768_F

Intron Information:

Intron Rank:

150936

Intron Class:

major

Intron Phase:

Intron Coordinates:

12477786 - 12487768

Intron Length:

9983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCAGA

5'SS Class:

major

3'SS Sequence:

ATTTCTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

CCTTATTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

42.7

Major BPS

79.5

0.73

0.9

36.9

Major PPT

85.1

0.79

0.7

82.3

28.9

Minor 5ss

31.9

-2.1

3.1

39.5

46.1

Minor BPS

69.6

0.69

1.5

80.33

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024829

12477472 - 12489725

12254