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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12488156_12489723_F

Intron Information:

Intron Rank:

150938

Intron Class:

major

Intron Phase:

Intron Coordinates:

12488156 - 12489723

Intron Length:

1568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GCATGTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TATTTCTGCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

65.3

0.34

0.9

57.3

38.5

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

49.2

-0.2

1.9

60.85

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041025

12477472 - 12489725

12254

ENSAPLT00000039709

12477472 - 12489725

12254

ENSAPLT00000024829

12477472 - 12489725

12254