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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12490845_12494057_F

Intron Information:

Intron Rank:

134579

Intron Class:

major

Intron Phase:

Intron Coordinates:

12490845 - 12494057

Intron Length:

3213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

CTTTCTGTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

38.1

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

68.6

0.42

1.1

61.6

44.5

Minor 5ss

45.1

-0.5

2.6

45.4

Minor BPS

48.7

-0

2.4

74.65

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037483

12489746 - 12504436

14691

ENSAPLT00000035187

12489746 - 12503116

13371

ENSAPLT00000022416

12489746 - 12504363

14618