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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12494251_12497016_F

Intron Information:

Intron Rank:

134586

Intron Class:

major

Intron Phase:

Intron Coordinates:

12494251 - 12497016

Intron Length:

2766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCACC

5'SS Class:

major

3'SS Sequence:

TGTTACTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TTTTTGTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

72.6

37.3

Major BPS

71.4

0.53

1.2

63.4

Major PPT

83.5

0.75

0.9

77.3

36.6

Minor 5ss

42.4

-0.8

2.8

53.9

36.9

Minor BPS

56.2

0.27

2.3

82.74

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035187

12489746 - 12503116

13371