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Intron Name: Anas_platyrhynchos_platyrhynchos_13_12569134_12569618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12569134 - 12569618

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TATTTTGCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TGTCCCTTAGTA

Flanking Amino Acid:

ATVNVTTKKPPPSQPPGNII

Intron Amino Acid Position:

834

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

69.3

35.8

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

78.7

0.64

0.9

74.2

36.2

Minor 5ss

29.9

-2.3

3.1

35.2

33.9

Minor BPS

65.9

0.49

1.6

74.01

37.5

Associated Gene:

Gene:

CNTN4

Ensembl Gene ID:

ENSAPLG00000004320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004510

12566330 - 12711550

145221